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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819060.1_cds_XP_016499904.1_13783
CDS Infomation

[gene=LOC107818414] [db_xref=GeneID:107818414] [protein=subtilisin-like protease SBT4.14] [protein_id=XP_016499904.1] [location=join(12948..13049,13130..13221,13332..13429,13505..13648,13739..13844,14267..14780,14891..14988,15062..15286,15380..15488,15565..15778,15995..16539)] [gbkey=CDS]
Sequence

ATGATGAGGAACAATCACTTCTGTTGGTTTCTGTCTTATCATCTTTTTCTAATCTTGATC
TTGACTGGCATTGAAGCTGCTGAAGGAGATAGAAAAGAAGCAGATGTCTACATTGTTTTC
TTGAAAGATCATCCGGTGAACGAAGAATCTGTATTTCAGAGACATATTAATGTCCTATCA
TCATTGAAGGAAAGTGATGGGGATGCAACAGAATCTCATGTTTATAGCTATACAAAAATC
TTCAATGCATTTGCAGCAAAGCTATCTCAACATGAAGTTCACAAGTTATCTAGCATGGAT
GAAGTGGTTTCTGTCATACCAAACAGATACAGGAAGCTACATACTACAAGATCATGGGAA
TTTATTGGTTTGCCTGCAACTGCAAAAAGAAGATTGAAAGGGGAGAGCAACATTATCGTG
GGTGTCTTCGATACAGGCATAACTCCTCAATCAAAAAGCTTTAAGGATGATGGTCTTGGT
CCTCCTCCAGTAAAATGGAAAGGAAGTTGTGGCCATTTTGCAAATTTTTCTGGATGCAAC
AACAAACTTATAGGGGCAAGATACTTCAAGCTGGACAAAGTTCCTGATCCAAATGACATA
TTGTCACCAATTGATGTGCACGGCCATGGAACACATACATCATCCACCCTAGCGGGAAGT
CTGGTGCCTGATGCTAGCTTGTTTGGTCTTGCCCGAGGGACTGCACGTGGAGCGGTTCCT
TCTGCTAGAGTGGCTATGTACAAAGTCTGTTGGGCGACCTCAGGTTGTGCAGATATTGAC
ATTCTAGCTGCATTTGAAGCTGCAATTAGTGATGGTGTGGACTTAATATCCATATCAATT
GGTGGTCTCAGTGGCAGTTATACAACTGATGTGATAGCCGTTGGGTCATTTCATGCCATG
AGAAAAGGGATTCTTACTGTGGCTTCTGCTGGAAATGATGGACCTAACCTCAACACTGTC
GCGAACCATGCACCATGGATGCTAACTGTAGCAGCTAGTGGCATTGATAGGGAGTTCAGG
AGTAAGGTGGAGTTGGGAAATGGGAGAATAGTCTCAGGAATTGGAGTCAACGCGTTTGAT
CCAAAGAAAAAATTGTATCCTCTTACGATGGGAGTTGATATGGCCAAGGGCTCTGATACT
CGAGACAGTTCAAGGTATTGTGGTGAAGGATCAATGGACCCTAGAAAGGTAAAGGGAAAG
CTTGTTTATTGCCAGTTGGGTACTTGGGGTGCTGATTCTGTTATAAAAGAACTTGGAGGG
ATCGGCACTATTATTGAAAGCGATCAGTTTCTTGATTCTGCCCCAATTTTCATGGCTCCT
GCAACAATAGTTAATTCCAGCATAGGGAAAAGCATTAATAACTATATGCATTTAGAGAGA
TTACCTTCAGCAGTAATATACAAATCACAGGAAGTTAAGATCAAAGCTCCATTCATTGCA
TCATTTTCATCAAGAGGTCCAAATCCGGGAACAAAACGCCTTCTGAAGCCTGATATTGCA
GCTCCAGGAATTGACATTCTGTCTTCTTACACCCCCTTGAAATCACTAACTGGTTTGAAA
GGCGATACTCAATATTCAGAATTCACCCTCATGTCTGGCACTTCTATGGCATGCCCTCAT
GTTGGCGGCGCAGCTGCTTATGTAAAGTCATACCATCCAGATTGGTCTCCTTCTGCTATT
AAGTCTGCCCTCATGACTACTGCAAGACCTATGAGCTCAAAGGTGGACAGGGAAGCAGAG
TTCGCGTATGGTGCTGGACAAGTTAATCCGGCGAAAGCAAGAAGTCCTGGATTAATTTAT
GAAATGGATGATATGTCATATATCCAATTCTTATGCCATGAAGGTTACAATTCATCATCA
GTCTCCAGTTTACTTCGACAACGGGTAAATTGCTCCACATTGATTCCTGCAAATGGGGAA
GATGCTATCAACTATCCCACAATGCAGTTTGGCCTAAAGAGTAATCAAGAACCAACCATT
GGCATTTTCAGGAGGAAAGTTACCAATGTTGGACAAGCTATATCTGTTTATAATGCCACT
ATCAGAGCTCCTAAGGGAGTGGATATCACAGTAAAACCAATGACTCTCTCGTTCACACGT
GCAATGCAGACAAGAAGTTTCAAGGTTGTTGTGAAGGCAAAACCAATGTCAAATGCTGTA
ATATTGTCAGGTTCACTCATTTGGAAGAGCTCCCGCCATCTTGTAAGAAGTCCTATTGTC
ATATATGATCCAAAGGTTTTTGATTAA

Peptide Sequence

PEP ID

XP_016499904.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT4.14 [Nicotiana tabacum]
Sequence

MMRNNHFCWFLSYHLFLILILTGIEAAEGDRKEADVYIVFLKDHPVNEESVFQRHINVLS
SLKESDGDATESHVYSYTKIFNAFAAKLSQHEVHKLSSMDEVVSVIPNRYRKLHTTRSWE
FIGLPATAKRRLKGESNIIVGVFDTGITPQSKSFKDDGLGPPPVKWKGSCGHFANFSGCN
NKLIGARYFKLDKVPDPNDILSPIDVHGHGTHTSSTLAGSLVPDASLFGLARGTARGAVP
SARVAMYKVCWATSGCADIDILAAFEAAISDGVDLISISIGGLSGSYTTDVIAVGSFHAM
RKGILTVASAGNDGPNLNTVANHAPWMLTVAASGIDREFRSKVELGNGRIVSGIGVNAFD
PKKKLYPLTMGVDMAKGSDTRDSSRYCGEGSMDPRKVKGKLVYCQLGTWGADSVIKELGG
IGTIIESDQFLDSAPIFMAPATIVNSSIGKSINNYMHLERLPSAVIYKSQEVKIKAPFIA
SFSSRGPNPGTKRLLKPDIAAPGIDILSSYTPLKSLTGLKGDTQYSEFTLMSGTSMACPH
VGGAAAYVKSYHPDWSPSAIKSALMTTARPMSSKVDREAEFAYGAGQVNPAKARSPGLIY
EMDDMSYIQFLCHEGYNSSSVSSLLRQRVNCSTLIPANGEDAINYPTMQFGLKSNQEPTI
GIFRRKVTNVGQAISVYNATIRAPKGVDITVKPMTLSFTRAMQTRSFKVVVKAKPMSNAV
ILSGSLIWKSSRHLVRSPIVIYDPKVFD

Transcript Sequence

Gene sequence data has not been registered.